Transcript: lnc-CD46-2:3

Basic information

LNCipedia transcript ID: lnc-CD46-2:3 
LNCipedia gene ID: lnc-CD46-2
Ensembl Gene ID: ENSG00000284237
Ensembl Transcript ID: ENST00000638446
Location (hg38): chr1:207959292-207969329
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7440 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000638446.1
Alternative gene names: ENSG00000284237.1; AL356275.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.6667 non-coding 
CPAT coding probability 45.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD46-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SERTAD4-26:1
5.1 lnc-SERTAD4-26:1
5.2 lnc-CD46-2:3