Transcript: lnc-CD46-4:1

Basic information

LNCipedia transcript ID: lnc-CD46-4:1 
LNCipedia gene ID: lnc-CD46-4
RefSeq ID: NR_026817
Location (hg38): chr1:207818379-207822596
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4218 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT009152; NR_026817; NR_026817.1
Alternative gene names: LOC148696


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.0591 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD46-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD46-4:1
4.0 lnc-CD46-4:1
4.1 lnc-CD46-4:1
5.0 lnc-CD46-4:1
5.1 lnc-CDK18-57:1
5.2 lnc-CD46-4:1