Transcript: lnc-CD47-9:1

Basic information

LNCipedia transcript ID: lnc-CD47-9:1 
LNCipedia gene ID: lnc-CD47-9
Location (hg38): chr3:105658269-105673993
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4722 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT090968
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 539.1217 coding 
CPAT coding probability 17.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD47-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD47-9:1
4.0 lnc-CD47-9:1
4.1 lnc-CD47-9:1
5.0 lnc-CD47-9:1
5.1 lnc-IFT57-34:1
5.2 lnc-CD47-9:1