Transcript: lnc-CD8B2-5:4

Basic information

LNCipedia transcript ID: lnc-CD8B2-5:4 
LNCipedia gene ID: lnc-CD8B2-5
Location (hg38): chr2:106767686-106778310
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 448 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003814; NONHSAT073044
Alternative gene names: XLOC_001616; linc-RGPD4-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.7499 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD8B2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C2orf40-4:3
3.1 lnc-C2orf40-5:3
4.0 lnc-C2orf40-5:3
4.1 lnc-C2orf40-5:3
5.0 lnc-C2orf40-5:3
5.1 lnc-SULT1C2-12:4
5.2 lnc-CD8B2-5:4