Transcript: lnc-CDC27-2:4

Basic information

LNCipedia transcript ID: lnc-CDC27-2:4 
LNCipedia gene ID: lnc-CDC27-2
Location (hg38): chr17:47303446-47323901
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 699 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110880
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -199.6262 non-coding 
CPAT coding probability 2.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDC27-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC040934.1-2:7
4.0 lnc-CDC27-2:4
4.1 lnc-CDC27-2:4
5.0 lnc-CDC27-2:4
5.1 lnc-ZNF652-52:3
5.2 lnc-CDC27-2:4