Transcript: lnc-CDH18-19:1

Basic information

LNCipedia transcript ID: lnc-CDH18-19:1 
LNCipedia gene ID: lnc-CDH18-19
Location (hg38): chr5:22278011-22638994
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 539 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT100736
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.7915 non-coding 
CPAT coding probability 2.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH18-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH18-19:1
4.0 lnc-CDH18-19:1
4.1 lnc-CDH18-19:1
5.0 lnc-CDH18-19:1
5.1 lnc-IRX2-165:1
5.2 lnc-CDH18-19:1