Transcript: lnc-CDH6-19:3

Basic information

LNCipedia transcript ID: lnc-CDH6-19:3 
LNCipedia gene ID: lnc-CDH6-19
Location (hg38): chr5:31363503-31374747
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2207 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000075481.1|MICT00000280472.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.3085 non-coding 
CPAT coding probability 5.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH6-19:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDH6-19:3
5.0 lnc-CDH6-19:3
5.1 lnc-CARD6-129:3
5.2 lnc-CDH6-19:3