Transcript: lnc-CDH8-10:7

Basic information

LNCipedia transcript ID: lnc-CDH8-10:7 
LNCipedia gene ID: lnc-CDH8-10
Location (hg38): chr16:63531088-63618046
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260658.1|ENST00000564290.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.2579 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH8-10:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDH8-10:7
5.0 lnc-CDH8-10:7
5.1 lnc-PSMB10-57:9
5.2 lnc-CDH8-10:7