Transcript: lnc-CDK18-1:2

Basic information

LNCipedia transcript ID: lnc-CDK18-1:2 
LNCipedia gene ID: lnc-CDK18-1
Location (hg38): chr1:205456058-205469024
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2756 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00000064
Alternative gene names: XLOC_000533; linc-CDK18-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4817 non-coding 
CPAT coding probability 3.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDK18-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDK18-1:2
3.1 lnc-CDK18-1:2
4.0 lnc-CDK18-1:2
4.1 lnc-CDK18-1:2
5.0 lnc-CDK18-1:2
5.1 lnc-CDK18-1:2
5.2 lnc-CDK18-1:2