Transcript: lnc-CDK20-8:9

Basic information

LNCipedia transcript ID: lnc-CDK20-8:9 
LNCipedia gene ID: lnc-CDK20-8
RefSeq ID: NR_135137
Location (hg38): chr9:88066435-88077900
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135137.1
Alternative gene names: LOC102724156


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.2744 non-coding 
CPAT coding probability 4.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDK20-8:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SEMA4D-34:3
5.1 lnc-SEMA4D-34:3
5.2 lnc-CDK20-8:9