Transcript: lnc-CDK6-1:3

Basic information

LNCipedia transcript ID: lnc-CDK6-1:3 
LNCipedia gene ID: lnc-CDK6-1
Location (hg38): chr7:92578319-92581806
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 455 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT121987
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.3602 non-coding 
CPAT coding probability 10.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDK6-1:3 no no no no

Available literature

  1. Wang (2015), Genome-Wide Microarray Analysis of Long Non-Coding RNAs in Eutopic Secretory Endometrium with Endometriosis., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK6-1:3
4.0 lnc-CDK6-1:3
4.1 lnc-CDK6-1:3
5.0 lnc-CDK6-1:3
5.1 lnc-PEX1-2:1
5.2 lnc-CDK6-1:3