Transcript: lnc-CDKL3-2:4

Basic information

LNCipedia transcript ID: lnc-CDKL3-2:4 
LNCipedia gene ID: lnc-CDKL3-2
Location (hg38): chr5:134319031-134371043
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 432 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT103844
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.7718 non-coding 
CPAT coding probability 40.48% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDKL3-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDKN2AIPNL-2:3
4.0 lnc-CDKL3-2:4
4.1 lnc-CDKL3-2:4
5.0 lnc-CDKL3-2:4
5.1 lnc-TIFAB-28:2
5.2 lnc-CDKL3-2:4