Transcript: lnc-CDKL3-2:7

Basic information

LNCipedia transcript ID: lnc-CDKL3-2:7 
LNCipedia gene ID: lnc-CDKL3-2
Location (hg38): chr5:134283194-134371043
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4503 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273345.1|HBMT00001168825.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 125.8082 coding 
CPAT coding probability 98.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDKL3-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDKL3-2:7
5.0 lnc-CDKL3-2:7
5.1 lnc-TIFAB-28:6
5.2 lnc-CDKL3-2:7