Transcript: lnc-CDKN2AIPNL-1:3

Basic information

LNCipedia transcript ID: lnc-CDKN2AIPNL-1:3 
LNCipedia gene ID: lnc-CDKN2AIPNL-1
RefSeq ID: NR_105044
Location (hg38): chr5:134429051-134435047
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 705 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105044; NR_105044.1
Alternative gene names: LOC102546229


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.6335 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDKN2AIPNL-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDKN2AIPNL-1:3
4.0 lnc-CDKN2AIPNL-1:3
4.1 lnc-CDKN2AIPNL-1:3
5.0 lnc-CDKN2AIPNL-1:3
5.1 lnc-TIFAB-27:2
5.2 lnc-CDKN2AIPNL-1:3