Transcript: lnc-CDR2L-2:3

Basic information

LNCipedia transcript ID: lnc-CDR2L-2:3 
LNCipedia gene ID: lnc-CDR2L-2
Location (hg38): chr17:74982380-74986040
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3661 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032398.1|ENCT00000178121.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.8807 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDR2L-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDR2L-2:3
5.0 lnc-CDR2L-2:3
5.1 lnc-TMEM94-26:2
5.2 lnc-CDR2L-2:3