Transcript: lnc-CDYL-1:3

Basic information

LNCipedia transcript ID: lnc-CDYL-1:3 
LNCipedia gene ID: lnc-CDYL-1
RefSeq ID: NR_122107
Location (hg38): chr6:4610565-4611919
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1190 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122107; NR_122107.1
Alternative gene names: KU-MEL-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.9221 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDYL-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDYL-1:3
4.0 lnc-CDYL-1:3
4.1 lnc-CDYL-1:3
5.0 lnc-CDYL-1:3
5.1 lnc-PRPF4B-53:1
5.2 lnc-CDYL-1:3