Transcript: lnc-CDYL2-6:11

Basic information

LNCipedia transcript ID: lnc-CDYL2-6:11 
LNCipedia gene ID: lnc-CDYL2-6
Location (hg38): chr16:80507569-80540910
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 407 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259867.1|ENST00000564411.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -346.6385 non-coding 
CPAT coding probability 15.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDYL2-6:11 yes no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDYL2-6:11
5.0 lnc-CDYL2-6:11
5.1 lnc-MAF-11:8
5.2 lnc-CDYL2-6:11