Transcript: lnc-CDYL2-6:7

Basic information

LNCipedia transcript ID: lnc-CDYL2-6:7 
LNCipedia gene ID: lnc-CDYL2-6
Location (hg38): chr16:80528644-80540488
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 660 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024739; NONHSAT143889
Alternative gene names: XLOC_012019; linc-MAF-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -272.3669 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDYL2-6:7 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDYL2-2:1
3.1 lnc-CDYL2-6:7
4.0 lnc-CDYL2-6:7
4.1 lnc-CDYL2-6:7
5.0 lnc-CDYL2-6:7
5.1 lnc-MAF-11:16
5.2 lnc-CDYL2-6:7