Transcript: lnc-CEACAM20-8:6

Basic information

LNCipedia transcript ID: lnc-CEACAM20-8:6 
LNCipedia gene ID: lnc-CEACAM20-8
Ensembl Gene ID: ENSG00000266903
Ensembl Transcript ID: ENST00000590796
Location (hg38): chr19:44632199-44718631
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 829 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066706; ENST00000590796.1
Alternative gene names: ENSG00000266903.1; CTB-171A8.1; AC243964.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 56.2732 non-coding 
CPAT coding probability 49.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CEACAM20-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF180-8:5
4.0 lnc-ZNF180-8:5
4.1 lnc-ZNF180-8:5
5.0 lnc-ZNF180-8:5
5.1 lnc-GPR4-24:6
5.2 lnc-CEACAM20-8:6