Transcript: lnc-CELA3A-5:18

Basic information

LNCipedia transcript ID: lnc-CELA3A-5:18 
LNCipedia gene ID: lnc-CELA3A-5
Location (hg38): chr1:22025505-22030800
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 777 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000218510.3|ENST00000420503.1
Alternative gene names: HSPC157


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 60.4288 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CELA3A-5:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00339:32
5.0 LINC00339:32
5.1 lnc-ZBTB40-4:18
5.2 lnc-CELA3A-5:18