Transcript: lnc-CENPJ-8:3

Basic information

LNCipedia transcript ID: lnc-CENPJ-8:3 
LNCipedia gene ID: lnc-CENPJ-8
Location (hg38): chr13:25030731-25047394
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10535 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000016552.1|MICT00000091785.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 28.162 non-coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CENPJ-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CENPJ-8:3
5.0 lnc-CENPJ-8:3
5.1 lnc-ZDHHC20-83:3
5.2 lnc-CENPJ-8:3