Transcript: lnc-CENPP-20:26

Basic information

LNCipedia transcript ID: lnc-CENPP-20:26 
LNCipedia gene ID: lnc-CENPP-20
Location (hg38): chr9:92141467-92160114
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2506 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: NONHSAT133166; ENST00000416438.2; ENST00000416438.6
Alternative gene names: ENSG00000225511.2; LINC00475; ENSG00000225511.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.0402 non-coding 
CPAT coding probability 9.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CENPP-20:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CENPP-3:11
4.0 LINC00475:6
4.1 LINC00475:6
5.0 LINC00475:6
5.1 lnc-FAM120A-50:26
5.2 lnc-CENPP-20:26