Transcript: lnc-CEP170-13:11

Basic information

LNCipedia transcript ID: lnc-CEP170-13:11 
LNCipedia gene ID: lnc-CEP170-13
Location (hg38): chr1:243078857-243082125
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000438255.1; RP11-261C10.3-013; OTTHUMT00000096175.1
Alternative gene names: ENSG00000214837.3; RP11-261C10.3; OTTHUMG00000039861.3; ENSG00000214837.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.7955 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP170-13:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CEP170-1:9
4.0 LINC01347:10
4.1 LINC01347:10
5.0 LINC01347:10
5.1 lnc-CHML-19:11
5.2 lnc-CEP170-13:11