Transcript: lnc-CEP170-13:15

Basic information

LNCipedia transcript ID: lnc-CEP170-13:15 
LNCipedia gene ID: lnc-CEP170-13
Location (hg38): chr1:243056876-243057848
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 324 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000399073.2; RP11-261C10.3-002; OTTHUMT00000096164.2; NONHSAT010584
Alternative gene names: ENSG00000214837.3; RP11-261C10.3; OTTHUMG00000039861.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.4601 non-coding 
CPAT coding probability 9.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP170-13:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CEP170-1:13
4.0 LINC01347:15
4.1 LINC01347:15
5.0 LINC01347:15
5.1 lnc-CHML-19:15
5.2 lnc-CEP170-13:15