Transcript: lnc-CERK-20:1

Basic information

LNCipedia transcript ID: lnc-CERK-20:1 
LNCipedia gene ID: lnc-CERK-20
Location (hg38): chr22:48161725-48164145
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2421 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_705_NR_026993
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.8388 non-coding 
CPAT coding probability 6.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CERK-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTA-299D3.8.1-6:1
4.0 lnc-CTA-299D3.8.1-6:1
4.1 lnc-CTA-299D3.8.1-6:1
5.0 lnc-CTA-299D3.8.1-6:1
5.1 lnc-CERK-14:1
5.2 lnc-CERK-20:1