Transcript: lnc-CETP-1:2

Basic information

LNCipedia transcript ID: lnc-CETP-1:2 
LNCipedia gene ID: lnc-CETP-1
Ensembl Gene ID: ENSG00000261114
Ensembl Transcript ID: ENST00000570210
Location (hg38): chr16:56941028-56941726
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 699 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570210.1; RP11-325K4.2-001; OTTHUMT00000432318.1; NONHSAT142723
Alternative gene names: ENSG00000261114.1; RP11-325K4.2; OTTHUMG00000176493.1; AC012181.2; AC012181.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.4173 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CETP-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CETP-1:2
4.0 lnc-CETP-1:2
4.1 lnc-CETP-1:2
5.0 lnc-CETP-1:2
5.1 lnc-ADGRG1-33:2
5.2 lnc-CETP-1:2