Transcript: lnc-CFAP47-2:1

Basic information

LNCipedia transcript ID: lnc-CFAP47-2:1 
LNCipedia gene ID: lnc-CFAP47-2
Location (hg38): chrX:35864858-35869631
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4774 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT136617
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2546 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CFAP47-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf22-2:1
4.0 lnc-CXorf22-2:1
4.1 lnc-CXorf22-2:1
5.0 lnc-CXorf22-2:1
5.1 lnc-GK-29:1
5.2 lnc-CFAP47-2:1