Transcript: lnc-CFC1-2:3

Basic information

LNCipedia transcript ID: lnc-CFC1-2:3 
LNCipedia gene ID: lnc-CFC1-2
Location (hg38): chr2:130723402-130755851
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5062 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229797.1|MICT00000199291.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2426 non-coding 
CPAT coding probability 43.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CFC1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CFC1-2:3
5.0 lnc-CFC1-2:3
5.1 lnc-PRSS40B-9:2
5.2 lnc-CFC1-2:3