Transcript: lnc-CGAS-3:1

Basic information

LNCipedia transcript ID: lnc-CGAS-3:1 
LNCipedia gene ID: lnc-CGAS-3
Location (hg38): chr6:73515752-73521568
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2319 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT113565
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 267.1111 coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CGAS-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MB21D1-3:3
4.0 lnc-MB21D1-3:3
4.1 lnc-MB21D1-3:3
5.0 lnc-MB21D1-3:3
5.1 lnc-CEP162-71:1
5.2 lnc-CGAS-3:1