Transcript: lnc-CHCHD3-2:1

Basic information

LNCipedia transcript ID: lnc-CHCHD3-2:1 
LNCipedia gene ID: lnc-CHCHD3-2
Location (hg38): chr7:133476086-133484301
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4918 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000097141.1|FTMT22500019989.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.4877 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHCHD3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHCHD3-2:1
5.0 lnc-CHCHD3-2:1
5.1 lnc-C7orf49-22:1
5.2 lnc-CHCHD3-2:1