Transcript: lnc-CHD2-4:8

Basic information

LNCipedia transcript ID: lnc-CHD2-4:8 
LNCipedia gene ID: lnc-CHD2-4
Location (hg38): chr15:93530242-93532874
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023520; NONHSAT050126
Alternative gene names: XLOC_011362; linc-MCTP2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.139 non-coding 
CPAT coding probability 7.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD2-4:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHD2-4:8
3.1 lnc-CHD2-4:8
4.0 lnc-CHD2-4:8
4.1 lnc-CHD2-4:8
5.0 lnc-CHD2-4:8
5.1 lnc-TTLL13P-78:24
5.2 lnc-CHD2-4:8