Transcript: lnc-CHD9-3:11

Basic information

LNCipedia transcript ID: lnc-CHD9-3:11 
LNCipedia gene ID: lnc-CHD9-3
Location (hg38): chr16:52612252-52613857
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 388 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT142545
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.8812 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD9-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD9-3:11
4.0 lnc-CHD9-3:11
4.1 lnc-CHD9-3:11
5.0 lnc-CHD9-3:11
5.1 lnc-ADGRG1-113:10
5.2 lnc-CHD9-3:11