Transcript: lnc-CHMP2B-5:2

Basic information

LNCipedia transcript ID: lnc-CHMP2B-5:2 
LNCipedia gene ID: lnc-CHMP2B-5
Location (hg38): chr3:86070510-86073656
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3147 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT090664
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.6435 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHMP2B-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHMP2B-5:2
4.0 lnc-CHMP2B-5:2
4.1 lnc-CHMP2B-5:2
5.0 lnc-CHMP2B-5:2
5.1 lnc-HTR1F-6:2
5.2 lnc-CHMP2B-5:2