Transcript: lnc-CHP1-5:1

Basic information

LNCipedia transcript ID: lnc-CHP1-5:1 
LNCipedia gene ID: lnc-CHP1-5
Location (hg38): chr15:41193343-41195549
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2207 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_AA043058_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.2321 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHP1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012652.1.1-5:1
4.0 lnc-AC012652.1.1-5:1
4.1 lnc-AC012652.1.1-5:1
5.0 lnc-AC012652.1.1-5:1
5.1 lnc-TMEM62-32:1
5.2 lnc-CHP1-5:1