Transcript: lnc-CHP1-6:4

Basic information

LNCipedia transcript ID: lnc-CHP1-6:4 
LNCipedia gene ID: lnc-CHP1-6
Location (hg38): chr15:41119362-41120121
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT041914; FPKM1_group_10057_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.1579 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHP1-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012652.1.1-6:2
4.0 lnc-AC012652.1.1-6:2
4.1 lnc-AC012652.1.1-6:2
5.0 lnc-AC012652.1.1-6:2
5.1 lnc-TMEM62-33:4
5.2 lnc-CHP1-6:4