Transcript: lnc-CHPF-4:2

Basic information

LNCipedia transcript ID: lnc-CHPF-4:2 
LNCipedia gene ID: lnc-CHPF-4
Location (hg38): chr2:219493634-219498702
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5069 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT077043
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 48.2898 non-coding 
CPAT coding probability 62.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHPF-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHPF-4:2
4.0 lnc-CHPF-4:2
4.1 lnc-CHPF-4:2
5.0 lnc-CHPF-4:2
5.1 lnc-FARSB-31:4
5.2 lnc-CHPF-4:2