Transcript: lnc-CHST10-5:6

Basic information

LNCipedia transcript ID: lnc-CHST10-5:6 
LNCipedia gene ID: lnc-CHST10-5
Location (hg38): chr2:100742306-100742967
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 662 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049429.1|FTMT20600006329.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.9531 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST10-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHST10-5:6
5.0 lnc-CHST10-5:6
5.1 lnc-AFF3-15:6
5.2 lnc-CHST10-5:6