Transcript: lnc-CHST12-4:1

Basic information

LNCipedia transcript ID: lnc-CHST12-4:1 
LNCipedia gene ID: lnc-CHST12-4
Location (hg38): chr7:2401753-2412786
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1424 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_3353_chr7:2441387-2444215_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.8004 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST12-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF3B-4:1
4.0 lnc-CHST12-4:1
4.1 lnc-CHST12-4:1
5.0 lnc-CHST12-4:1
5.1 lnc-GPER1-56:1
5.2 lnc-CHST12-4:1