Transcript: lnc-CHST14-3:1

Basic information

LNCipedia transcript ID: lnc-CHST14-3:1 
LNCipedia gene ID: lnc-CHST14-3
Location (hg38): chr15:40488125-40508739
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 491 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023376; NONHSAT041854
Alternative gene names: XLOC_011222; linc-RPUSD2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.6203 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST14-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPUSD2-1:2
3.1 lnc-RPUSD2-1:2
4.0 lnc-RPUSD2-1:2
4.1 lnc-RPUSD2-1:2
5.0 lnc-RPUSD2-1:2
5.1 lnc-TMEM62-52:3
5.2 lnc-CHST14-3:1