Transcript: lnc-CHST9-6:6

Basic information

LNCipedia transcript ID: lnc-CHST9-6:6 
LNCipedia gene ID: lnc-CHST9-6
RefSeq ID: NR_134589
Location (hg38): chr18:27336991-27342656
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 447 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134589.1
Alternative gene names: LOC105372038


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.0663 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST9-6:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMAD2-141:6
5.1 lnc-SMAD2-141:6
5.2 lnc-CHST9-6:6