Transcript: lnc-CHSY1-5:19

Basic information

LNCipedia transcript ID: lnc-CHSY1-5:19 
LNCipedia gene ID: lnc-CHSY1-5
RefSeq ID: NR_135831
Location (hg38): chr15:100913203-100919283
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4174 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135831.1
Alternative gene names: LOC101927751


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 148.0334 coding 
CPAT coding probability 15.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHSY1-5:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CIB1-110:6
5.1 lnc-CIB1-110:6
5.2 lnc-CHSY1-5:19