Transcript: lnc-CHTF8-5:1

Basic information

LNCipedia transcript ID: lnc-CHTF8-5:1 
LNCipedia gene ID: lnc-CHTF8-5
Location (hg38): chr16:69179871-69180118
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 248 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT143322; FPKM1_group_11801_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.0609 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHTF8-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHTF8-5:1
4.0 lnc-CHTF8-5:1
4.1 lnc-CHTF8-5:1
5.0 lnc-CHTF8-5:1
5.1 lnc-NOB1-20:1
5.2 lnc-CHTF8-5:1