Transcript: lnc-CHTF8-9:1

Basic information

LNCipedia transcript ID: lnc-CHTF8-9:1 
LNCipedia gene ID: lnc-CHTF8-9
Location (hg38): chr16:69184770-69187013
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 525 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000029702.1|MICT00000135224.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.2919 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHTF8-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHTF8-9:1
5.0 lnc-CHTF8-9:1
5.1 lnc-NOB1-19:1
5.2 lnc-CHTF8-9:1