Transcript: lnc-CILP2-1:1

Basic information

LNCipedia transcript ID: lnc-CILP2-1:1 
LNCipedia gene ID: lnc-CILP2-1
Location (hg38): chr19:19605881-19609182
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1928 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000559614.1; AC002306.1-001; OTTHUMT00000417788.1; NONHSAT063075
Alternative gene names: ENSG00000259242.1; AC002306.1; OTTHUMG00000172311.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7005 non-coding 
CPAT coding probability 8.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CILP2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CILP2-1:1
4.0 lnc-CILP2-1:1
4.1 lnc-CILP2-1:1
5.0 lnc-CILP2-1:1
5.1 lnc-MPV17L2-46:1
5.2 lnc-CILP2-1:1