Transcript: lnc-CKS1B-2:2

Basic information

LNCipedia transcript ID: lnc-CKS1B-2:2 
LNCipedia gene ID: lnc-CKS1B-2
Location (hg38): chr1:154961830-154962623
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 794 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271380.1|ENST00000605085.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 52.3353 non-coding 
CPAT coding probability 2.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CKS1B-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CKS1B-2:2
5.0 lnc-CKS1B-2:2
5.1 lnc-LENEP-5:2
5.2 lnc-CKS1B-2:2