Transcript: lnc-CLCNKB-1:13

Basic information

LNCipedia transcript ID: lnc-CLCNKB-1:13 
LNCipedia gene ID: lnc-CLCNKB-1
Location (hg38): chr1:16183528-16184162
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 514 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000846; NONHSAT001089
Alternative gene names: XLOC_000061; linc-C1orf144-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.5749 non-coding 
CPAT coding probability 7.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLCNKB-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLCNKB-1:1
3.1 lnc-CLCNKB-3:1
4.0 lnc-CLCNKB-3:1
4.1 lnc-CLCNKB-1:13
5.0 lnc-CLCNKB-1:13
5.1 lnc-SZRD1-10:13
5.2 lnc-CLCNKB-1:13