Transcript: lnc-CLCNKB-1:7

Basic information

LNCipedia transcript ID: lnc-CLCNKB-1:7 
LNCipedia gene ID: lnc-CLCNKB-1
Location (hg38): chr1:16157111-16158698
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1588 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227959.1|FTMT20400000717.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.9962 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLCNKB-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLCNKB-1:7
5.0 lnc-CLCNKB-1:7
5.1 lnc-SZRD1-10:7
5.2 lnc-CLCNKB-1:7