Transcript: lnc-CLDN11-9:1

Basic information

LNCipedia transcript ID: lnc-CLDN11-9:1 
LNCipedia gene ID: lnc-CLDN11-9
Location (hg38): chr3:170599188-170599388
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 201 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucExp_135_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -225.8054 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN11-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SKIL-9:1
4.0 lnc-SKIL-9:1
4.1 lnc-SKIL-9:1
5.0 lnc-SKIL-9:1
5.1 lnc-LRRIQ4-21:1
5.2 lnc-CLDN11-9:1