Transcript: lnc-CLDN12-3:5

Basic information

LNCipedia transcript ID: lnc-CLDN12-3:5 
LNCipedia gene ID: lnc-CLDN12-3
Location (hg38): chr7:90403484-90494416
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 420 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT121912
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -176.8416 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLDN12-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTPBP10-3:4
4.0 lnc-CLDN12-3:5
4.1 lnc-CLDN12-3:5
5.0 lnc-CLDN12-3:5
5.1 lnc-LAMTOR4-120:7
5.2 lnc-CLDN12-3:5