Transcript: lnc-CLDN12-3:6

Basic information

LNCipedia transcript ID: lnc-CLDN12-3:6 
LNCipedia gene ID: lnc-CLDN12-3
Location (hg38): chr7:90403519-90513383
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 338 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT121913
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -176.8416 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLDN12-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTPBP10-3:5
4.0 lnc-CLDN12-3:6
4.1 lnc-CLDN12-3:6
5.0 lnc-CLDN12-3:6
5.1 lnc-LAMTOR4-120:8
5.2 lnc-CLDN12-3:6